crispr-analysis-utils/.github/workflows/docs.yml at main · EngreitzLab/crispr-analysis-utils · GitHub

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name: Publish docs

on:
  push:
    branches: [main]
  pull_request:
  workflow_dispatch:

env:
  FORCE_JAVASCRIPT_ACTIONS_TO_NODE24: "true"

permissions:
  contents: read
  pages: write
  id-token: write

concurrency:
  group: pages
  cancel-in-progress: false

jobs:
  build:
    runs-on: ubuntu-latest
    steps:
      - uses: actions/checkout@v4

      - uses: actions/setup-python@v5
        with:
          python-version: "3.11"

      - name: Install Python docs dependencies
        run: |
          python -m pip install --upgrade pip
          python -m pip install -e ".[docs]"

      - name: Build Python documentation
        run: mkdocs build --strict --site-dir site

      - uses: r-lib/actions/setup-r@v2
        with:
          r-version: release

      - uses: r-lib/actions/setup-r-dependencies@v2
        with:
          packages: |
            any::pkgdown
            any::roxygen2
            any::testthat

      - name: Build R documentation
        run: Rscript -e 'roxygen2::roxygenise(); pkgdown::build_site(new_process = FALSE, override = list(destination = "site/r"))'

      - name: Verify R site output exists
        run: test -f site/r/index.html

      - uses: actions/upload-pages-artifact@v3
        if: github.event_name != 'pull_request'
        with:
          path: site

  deploy:
    if: github.event_name != 'pull_request'
    environment:
      name: github-pages
      url: ${{ steps.deployment.outputs.page_url }}
    runs-on: ubuntu-latest
    needs: build
    steps:
      - uses: actions/deploy-pages@v4
        id: deployment