pyproject.toml

# DataLab setup configuration file

[build-system]
requires = ["setuptools"]
build-backend = "setuptools.build_meta"

[project]
name = "datalab-platform"
authors = [{ name = "Pierre Raybaut", email = "p.raybaut@codra.fr" }]
maintainers = [
    { name = "DataLab Platform Developers", email = "p.raybaut@codra.fr" },
]
description = "DataLab is a data processing and analysis software for scientific and industrial applications"
readme = "README.md"
license = "BSD-3-Clause"
license-files = ["LICENSE"]
classifiers = [
    "Development Status :: 5 - Production/Stable",
    "Intended Audience :: Developers",
    "Intended Audience :: Education",
    "Intended Audience :: Science/Research",
    "Intended Audience :: End Users/Desktop",
    "Operating System :: MacOS :: MacOS X",
    "Operating System :: Microsoft :: Windows :: Windows 7",
    "Operating System :: Microsoft :: Windows :: Windows 8",
    "Operating System :: Microsoft :: Windows :: Windows 10",
    "Operating System :: Microsoft :: Windows :: Windows 11",
    "Operating System :: POSIX :: Linux",
    "Programming Language :: Python :: 3.9",
    "Programming Language :: Python :: 3.10",
    "Programming Language :: Python :: 3.11",
    "Programming Language :: Python :: 3.12",
    "Programming Language :: Python :: 3.13",
    "Programming Language :: Python :: 3.14",
    "Topic :: Scientific/Engineering",
    "Topic :: Scientific/Engineering :: Image Processing",
    "Topic :: Scientific/Engineering :: Human Machine Interfaces",
    "Topic :: Scientific/Engineering :: Visualization",
    "Topic :: Software Development :: Libraries :: Python Modules",
    "Topic :: Software Development :: Widget Sets",
]
requires-python = ">=3.9, <4"
dependencies = [
    "guidata >= 3.13.4",
    "PlotPy >= 2.8.2",
    "Sigima >= 1.1.0",
    "NumPy >= 1.22, < 2.5",
    "SciPy >= 1.10.1, < 1.17",
    "scikit-image >= 0.19.2, < 0.27",
    "pandas >= 1.4, < 3.0",
    "PyWavelets >= 1.2, < 2.0",
    "psutil >= 5.8",
    "packaging >= 21.3",
    # Web API server for HTTP/JSON remote control and notebook integration
    "fastapi >= 0.110.0",
    "uvicorn[standard] >= 0.27.0",
    "pydantic >= 2.0",
]
dynamic = ["version"]

[project.urls]
Homepage = "https://datalab-platform.com/"
Documentation = "https://datalab-platform.com/"

[project.gui-scripts]
datalab = "datalab.app:run"
datalab-demo = "datalab.tests.scenarios.demo:run"
datalab-tests = "datalab.tests:run"

[project.optional-dependencies]
qt = ["PyQt5 >= 5.15.6"]
opencv = ["opencv-python-headless >= 4.8.1.78"]
exe = [
    # This section is used to build the standalone executable with PyInstaller for the
    # official stand-alone releases of DataLab.
    # For reproducibility, the PyInstaller version is pinned for each DataLab release.
    "pyinstaller == 6.16.0",  # DataLab 1.0
    "opencv-python-headless >= 4.8.1.78",
    "PyQt5 >= 5.15.6",
]
dev = [
    "build",
    "babel",
    "Coverage",
    "pylint",
    "ruff",
    "pre-commit",
]
doc = [
    "sphinx",
    "sphinx_intl",
    "sphinx-sitemap",
    "myst_parser",
    "sphinx_design",
    "sphinx-copybutton",
    "pydata-sphinx-theme",
]
test = ["pytest", "pytest-xvfb", "httpx"]

[tool.setuptools.packages.find]
include = ["datalab*"]

[tool.setuptools.package-data]
"*" = [
    "*.pdf",
    "*.png",
    "*.svg",
    "*.mo",
    "*.txt",
    "*.json",
    "*.dlabroi",
    "*.dlabmeta",
    "*.dlabgrid",
    "*_test.h5",
    "*.npy",
    "*.dcm",
    "*.scor-data",
    "*.tiff",
    "*.jpg",
    "*.sif",
    "*.csv",
    "*.mat",
    "*.js",
    "*.css",
    "*.html",
    "*.buildinfo",
    "*.inv",
]

[tool.setuptools.dynamic]
version = { attr = "datalab.__version__" }

[tool.pytest.ini_options]
addopts = "datalab --import-mode=importlib"
# addopts = "datalab --import-mode=importlib --show-windows"  # Disable offscreen mode
filterwarnings = [
    # Ignore specific deprecation warnings from external libraries
    "ignore::DeprecationWarning:pandas.*",
    # Ignore specific user warnings from Sigima (expected behavior)
    "ignore:Multiple crossing points found. Returning first.:UserWarning:sigima.*",
    "ignore:Multiple crossing points found. Returning last.:UserWarning:sigima.*",
]

[tool.ruff]
exclude = [".git", ".vscode", "build", "dist", "*.ipynb","venv*",".venv*",]
line-length = 88                               # Same as Black.
indent-width = 4                               # Same as Black.
target-version = "py39"                        # Assume Python 3.9.

[tool.ruff.lint]
# all rules can be found here: https://beta.ruff.rs/docs/rules/
select = [
    "D202",   # No blank lines allowed after function docstring.
    "D403",   # First word of docstring should be properly capitalized.
    "E",      # Pycodestyle error
    "F",      # Pyflakes
    "I",      # Isort
    "NPY201", # Numpy-specific checks
    "RUF022", # Unsorted __all__
    "W"       # Pycodestyle warning
]
ignore = [
    "E203", # space before : (needed for how black formats slicing)
]

[tool.ruff.format]
quote-style = "double"            # Like Black, use double quotes for strings.
indent-style = "space"            # Like Black, indent with spaces, rather than tabs.
skip-magic-trailing-comma = false # Like Black, respect magic trailing commas.
line-ending = "auto"              # Like Black, automatically detect the appropriate line ending.

[tool.ruff.lint.per-file-ignores]
"doc/*" = ["E402"]

[tool.ruff.lint.pydocstyle]
convention = "google"