index.html

---
layout: default
title: Home
---
{% assign total_data = 0 %}
{% assign total_constructs = 0 %}
{% for e in site.entries %}
  {% assign total_data = total_data | plus: e.data_points %}
  {% assign total_constructs = total_constructs | plus: e.construct_count %}
{% endfor %}

<section class="hero">
  <h1>RNA Mapping Database</h1>
  <p class="hero-sub">
    Chemical Mapping Data of
    <strong>{% include comma.html n=total_data %}</strong> data points across
    <strong>{% include comma.html n=site.entries.size %}</strong> entries and
    <strong>{% include comma.html n=total_constructs %}</strong> RNA constructs.
  </p>

  <form class="hero-search" action="{{ '/browse/' | relative_url }}" method="get" role="search">
    <input type="search" name="q" placeholder="Search entries by ID, name, author, PubMed…" aria-label="Search RMDB">
    <button type="submit">Search</button>
  </form>
</section>

<section class="about-blurb">
  <p>
    The <u>R</u>NA <u>M</u>apping <u>D</u>ata<u>b</u>ase is an archive of diverse structural mapping experiments
    performed on RNA (SHAPE, DMS, CMCT, 1M7, mutate-and-map, and more). Each entry is hand-curated and
    annotated, stored in the open <a href="{{ '/deposit/specs/' | relative_url }}">RDAT format</a>, and
    versioned through git.
  </p>
</section>

<section class="latest">
  <h2>Latest entries</h2>
  <ul class="entry-grid">
    {% assign latest = site.entries | sort: 'date' | reverse %}
    {% for e in latest limit: 12 %}
      <li class="entry-card">
        <a href="{{ e.url | relative_url }}">
          {% if e.thumbnail %}
            <img src="{{ e.thumbnail | relative_url }}"
                 loading="lazy"
                 alt="Thumbnail for {{ e.rmdb_id }}">
          {% endif %}
          <div class="entry-card-body">
            <code class="entry-id">{{ e.rmdb_id }}</code>
            <p class="entry-card-name">{{ e.name }}</p>
            {% if e.creation_date %}<p class="muted small">{{ e.creation_date }}</p>{% endif %}
          </div>
        </a>
      </li>
    {% endfor %}
  </ul>
  <p><a href="{{ '/browse/' | relative_url }}">Browse all entries →</a></p>
</section>