@@ -480,6 +480,8 @@ if [[ $ALIEN_JDL_SSPLITWF != "1" ]]; then
480480else
481481 # running the wf in split mode
482482 echo " We will run the workflow in SPLIT mode!"
483+ echo " ALIEN_JDL_STARTSPLITSTEP = $ALIEN_JDL_STARTSPLITSTEP "
484+ echo " ALIEN_JDL_SSPLITSTEP = $ALIEN_JDL_SSPLITSTEP "
483485 WORKFLOW_PARAMETERS_START=$WORKFLOW_PARAMETERS
484486
485487 if ([[ -z " $ALIEN_JDL_STARTSPLITSTEP " ]] && [[ -z " $ALIEN_JDL_SSPLITSTEP " ]]) || [[ " $ALIEN_JDL_SSPLITSTEP " -eq 1 ]] || ( [[ -n $ALIEN_JDL_STARTSPLITSTEP ]] && [[ " $ALIEN_JDL_STARTSPLITSTEP " -le 1 ]]) || [[ " $ALIEN_JDL_SSPLITSTEP " == " all" ]]; then
580582 fi
581583 fi
582584
583- if ([[ -z " $ALIEN_JDL_SSPLITSTEP " ]] && [[ -z " $ALIEN_JDL_SSPLITSTEP " ]]) || [[ " $ALIEN_JDL_SSPLITSTEP " -eq 3 ]] || ( [[ -n $ALIEN_JDL_STARTSPLITSTEP ]] && [[ " $ALIEN_JDL_STARTSPLITSTEP " -le 3 ]]) || [[ " $ALIEN_JDL_SSPLITSTEP " -eq " all" ]]; then
585+ if ([[ -z " $ALIEN_JDL_STARTSPLITSTEP " ]] && [[ -z " $ALIEN_JDL_SSPLITSTEP " ]]) || [[ " $ALIEN_JDL_SSPLITSTEP " -eq 3 ]] || ( [[ -n $ALIEN_JDL_STARTSPLITSTEP ]] && [[ " $ALIEN_JDL_STARTSPLITSTEP " -le 3 ]]) || [[ " $ALIEN_JDL_SSPLITSTEP " == " all" ]]; then
584586 # 3. matching, calib, AOD, potentially QC
585587 WORKFLOW_PARAMETERS=$WORKFLOW_PARAMETERS_START
586588 if [[ " $ALIEN_JDL_KEEPQCSEPARATE " == " 1" ]]; then
635637 fi
636638 fi
637639 if [[ " $ALIEN_JDL_KEEPQCSEPARATE " == " 1" ]]; then
638- if ([[ -z " $ALIEN_JDL_SSPLITSTEP " ]] && [[ -z " $ALIEN_JDL_SSPLITSTEP " ]]) || [[ " $ALIEN_JDL_SSPLITSTEP " -eq 4 ]] || ( [[ -n $ALIEN_JDL_STARTSPLITSTEP ]] && [[ " $ALIEN_JDL_STARTSPLITSTEP " -le 4 ]]) || [[ " $ALIEN_JDL_SSPLITSTEP " -eq " all" ]]; then
640+ if ([[ -z " $ALIEN_JDL_STARTSPLITSTEP " ]] && [[ -z " $ALIEN_JDL_SSPLITSTEP " ]]) || [[ " $ALIEN_JDL_SSPLITSTEP " -eq 4 ]] || ( [[ -n $ALIEN_JDL_STARTSPLITSTEP ]] && [[ " $ALIEN_JDL_STARTSPLITSTEP " -le 4 ]]) || [[ " $ALIEN_JDL_SSPLITSTEP " == " all" ]]; then
639641 # 4. QC
640642 WORKFLOW_PARAMETERS=" QC"
641643 echo " WORKFLOW_PARAMETERS=$WORKFLOW_PARAMETERS "
649651 export GLOBAL_READER_NEEDS_SV=" 0"
650652 export SVERTEXING_SOURCES=" none"
651653 WORKFLOW_DETECTORS_EXCLUDE_QC_SCRIPT+=" ,CPV"
654+ echo " QC_JSON_FROM_OUTSIDE = $QC_JSON_FROM_OUTSIDE "
652655 env $SETTING_ROOT_OUTPUT IS_SIMULATED_DATA=0 WORKFLOWMODE=print TFDELAY=$TFDELAYSECONDS WORKFLOW_DETECTORS=ALL WORKFLOW_DETECTORS_EXCLUDE=$DETECTORS_EXCLUDE WORKFLOW_DETECTORS_USE_GLOBAL_READER_TRACKS=$READ_TRACKS WORKFLOW_DETECTORS_USE_GLOBAL_READER_CLUSTERS=$READ_CLUSTERS WORKFLOW_DETECTORS_EXCLUDE_GLOBAL_READER_TRACKS= WORKFLOW_DETECTORS_EXCLUDE_QC=$WORKFLOW_DETECTORS_EXCLUDE_QC_SCRIPT ,$DETECTORS_EXCLUDE ./run-workflow-on-inputlist.sh $INPUT_TYPE list.list >> workflowconfig.log
653656 # run it
654657 if [[ " 0$RUN_WORKFLOW " != " 00" ]]; then
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